Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Pdlim4P70271 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.91□□□□□ -0.66
Pdlim4P70271 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pdlim4P70271 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pdlim4P70271 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pdlim4P70271 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pdlim4P70271 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pdlim4P70271 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Mir874-201ENSMUST00000104769 76 ntBASIC10.91□□□□□ -0.66
Pdlim4P70271 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.91□□□□□ -0.66
Pdlim4P70271 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.91□□□□□ -0.66
Pdlim4P70271 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.91□□□□□ -0.66
Pdlim4P70271 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.91□□□□□ -0.66
Pdlim4P70271 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Gm5745-201ENSMUST00000183748 313 ntBASIC10.91□□□□□ -0.66
Pdlim4P70271 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.91□□□□□ -0.66
Pdlim4P70271 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.91□□□□□ -0.66
Pdlim4P70271 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pdlim4P70271 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pdlim4P70271 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.9□□□□□ -0.66
Pdlim4P70271 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.9□□□□□ -0.66
Pdlim4P70271 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.9□□□□□ -0.66
Pdlim4P70271 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.9□□□□□ -0.66
Pdlim4P70271 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.9□□□□□ -0.66
Pdlim4P70271 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Gm6152-201ENSMUST00000151704 340 ntBASIC10.9□□□□□ -0.66
Pdlim4P70271 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.9□□□□□ -0.66
Pdlim4P70271 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.9□□□□□ -0.66
Pdlim4P70271 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Gm8463-201ENSMUST00000208573 613 ntBASIC10.9□□□□□ -0.66
Pdlim4P70271 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Pdlim4P70271 Gm18473-201ENSMUST00000220543 868 ntBASIC10.9□□□□□ -0.66
Pdlim4P70271 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.9□□□□□ -0.66
Pdlim4P70271 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.9□□□□□ -0.66
Pdlim4P70271 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pdlim4P70271 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pdlim4P70271 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pdlim4P70271 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Pck2-205ENSMUST00000226352 2784 ntBASIC10.9□□□□□ -0.66
Pdlim4P70271 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pdlim4P70271 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pdlim4P70271 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pdlim4P70271 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pdlim4P70271 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pdlim4P70271 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Pdlim4P70271 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pdlim4P70271 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pdlim4P70271 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms