Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Six5P70178 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.24□□□□□ -0.45
Six5P70178 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.24□□□□□ -0.45
Six5P70178 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.24□□□□□ -0.45
Six5P70178 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.24□□□□□ -0.45
Six5P70178 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Six5P70178 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.24□□□□□ -0.45
Six5P70178 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.24□□□□□ -0.45
Six5P70178 Gm27486-201ENSMUST00000184923 80 ntBASIC12.24□□□□□ -0.45
Six5P70178 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.24□□□□□ -0.45
Six5P70178 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.24□□□□□ -0.45
Six5P70178 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.24□□□□□ -0.45
Six5P70178 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.24□□□□□ -0.45
Six5P70178 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.24□□□□□ -0.45
Six5P70178 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Six5P70178 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Six5P70178 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Six5P70178 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Six5P70178 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six5P70178 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Six5P70178 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Six5P70178 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Six5P70178 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.23□□□□□ -0.45
Six5P70178 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Six5P70178 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.23□□□□□ -0.45
Six5P70178 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.23□□□□□ -0.45
Six5P70178 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.23□□□□□ -0.45
Six5P70178 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.23□□□□□ -0.45
Six5P70178 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Six5P70178 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Six5P70178 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.23□□□□□ -0.45
Six5P70178 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Six5P70178 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Six5P70178 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six5P70178 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Six5P70178 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.22□□□□□ -0.45
Six5P70178 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Six5P70178 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Six5P70178 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.22□□□□□ -0.45
Six5P70178 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Six5P70178 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms