Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Rpl39P62892 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39P62892 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.3□□□□□ -0.92
Rpl39P62892 Gm14494-201ENSMUST00000118786 435 ntBASIC9.3□□□□□ -0.92
Rpl39P62892 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.3□□□□□ -0.92
Rpl39P62892 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.3□□□□□ -0.92
Rpl39P62892 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC9.3□□□□□ -0.92
Rpl39P62892 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Rpl39P62892 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9.3□□□□□ -0.92
Rpl39P62892 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.3□□□□□ -0.92
Rpl39P62892 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39P62892 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39P62892 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.3□□□□□ -0.92
Rpl39P62892 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.3□□□□□ -0.92
Rpl39P62892 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.3□□□□□ -0.92
Rpl39P62892 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39P62892 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.3□□□□□ -0.92
Rpl39P62892 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Rpl39P62892 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.29□□□□□ -0.92
Rpl39P62892 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Rpl39P62892 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.29□□□□□ -0.92
Rpl39P62892 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC9.29□□□□□ -0.92
Rpl39P62892 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.29□□□□□ -0.92
Rpl39P62892 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.29□□□□□ -0.92
Rpl39P62892 Gm25948-201ENSMUST00000175334 112 ntBASIC9.29□□□□□ -0.92
Rpl39P62892 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Mir6990-201ENSMUST00000183724 91 ntBASIC9.29□□□□□ -0.92
Rpl39P62892 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC9.29□□□□□ -0.92
Rpl39P62892 Gm10766-202ENSMUST00000194123 606 ntBASIC9.29□□□□□ -0.92
Rpl39P62892 Gm19931-201ENSMUST00000198920 368 ntBASIC9.29□□□□□ -0.92
Rpl39P62892 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Rpl39P62892 Gm9229-201ENSMUST00000222777 126 ntBASIC9.29□□□□□ -0.92
Rpl39P62892 AC124549.3-201ENSMUST00000225541 367 ntBASIC9.29□□□□□ -0.92
Rpl39P62892 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Rpl39P62892 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.29□□□□□ -0.92
Rpl39P62892 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.29□□□□□ -0.92
Rpl39P62892 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39P62892 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Rpl39P62892 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39P62892 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39P62892 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC9.28□□□□□ -0.92
Rpl39P62892 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms