Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.51□□□□□ -0.41
Cdkn2bP55271 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Gm27989-201ENSMUST00000184721 107 ntBASIC12.51□□□□□ -0.41
Cdkn2bP55271 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.51□□□□□ -0.41
Cdkn2bP55271 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.51□□□□□ -0.41
Cdkn2bP55271 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdkn2bP55271 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.5□□□□□ -0.41
Cdkn2bP55271 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Gm24694-201ENSMUST00000180054 110 ntBASIC12.5□□□□□ -0.41
Cdkn2bP55271 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Gm27663-201ENSMUST00000184839 110 ntBASIC12.5□□□□□ -0.41
Cdkn2bP55271 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.5□□□□□ -0.41
Cdkn2bP55271 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdkn2bP55271 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.5□□□□□ -0.41
Cdkn2bP55271 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.5□□□□□ -0.41
Cdkn2bP55271 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Cdkn2bP55271 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Gm22189-201ENSMUST00000103822 86 ntBASIC12.49□□□□□ -0.41
Cdkn2bP55271 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.49□□□□□ -0.41
Cdkn2bP55271 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms