Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Fdft1P53798 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Fdft1P53798 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.07□□□□□ -0.32
Fdft1P53798 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Fdft1P53798 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Fdft1P53798 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Fdft1P53798 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Fdft1P53798 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Mir6392-201ENSMUST00000184924 108 ntBASIC13.07□□□□□ -0.32
Fdft1P53798 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.07□□□□□ -0.32
Fdft1P53798 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.07□□□□□ -0.32
Fdft1P53798 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.07□□□□□ -0.32
Fdft1P53798 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Gm45841-201ENSMUST00000207700 164 ntBASIC13.07□□□□□ -0.32
Fdft1P53798 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Fdft1P53798 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Fdft1P53798 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Fdft1P53798 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Fdft1P53798 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Fdft1P53798 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Fdft1P53798 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Fdft1P53798 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Fdft1P53798 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.06□□□□□ -0.32
Fdft1P53798 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.06□□□□□ -0.32
Fdft1P53798 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.06□□□□□ -0.32
Fdft1P53798 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.06□□□□□ -0.32
Fdft1P53798 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.06□□□□□ -0.32
Fdft1P53798 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.06□□□□□ -0.32
Fdft1P53798 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Fdft1P53798 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Fdft1P53798 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Fdft1P53798 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.06□□□□□ -0.32
Fdft1P53798 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Fdft1P53798 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.06□□□□□ -0.32
Fdft1P53798 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.06□□□□□ -0.32
Fdft1P53798 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.06□□□□□ -0.32
Fdft1P53798 Gm18624-201ENSMUST00000220966 658 ntBASIC13.06□□□□□ -0.32
Fdft1P53798 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.06□□□□□ -0.32
Fdft1P53798 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.06□□□□□ -0.32
Fdft1P53798 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.06□□□□□ -0.32
Fdft1P53798 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Fdft1P53798 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fdft1P53798 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms