Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC19.76■□□□□ 0.75
Cux1P53564 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC19.76■□□□□ 0.75
Cux1P53564 Gm12266-201ENSMUST00000120311 962 ntBASIC19.76■□□□□ 0.75
Cux1P53564 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cux1P53564 Gm27530-201ENSMUST00000184096 98 ntBASIC19.76■□□□□ 0.75
Cux1P53564 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC19.76■□□□□ 0.75
Cux1P53564 Spcs1-203ENSMUST00000226374 592 ntBASIC19.76■□□□□ 0.75
Cux1P53564 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cux1P53564 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC19.75■□□□□ 0.75
Cux1P53564 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC19.75■□□□□ 0.75
Cux1P53564 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC19.75■□□□□ 0.75
Cux1P53564 Gm19353-201ENSMUST00000184561 445 ntBASIC19.75■□□□□ 0.75
Cux1P53564 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC19.75■□□□□ 0.75
Cux1P53564 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cux1P53564 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cux1P53564 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cux1P53564 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Cux1P53564 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cux1P53564 Gm6039-201ENSMUST00000121667 1250 ntBASIC19.74■□□□□ 0.75
Cux1P53564 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC19.74■□□□□ 0.75
Cux1P53564 Gm9211-201ENSMUST00000182882 975 ntBASIC19.74■□□□□ 0.75
Cux1P53564 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC19.74■□□□□ 0.75
Cux1P53564 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cux1P53564 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC19.74■□□□□ 0.75
Cux1P53564 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cux1P53564 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC19.74■□□□□ 0.75
Cux1P53564 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cux1P53564 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cux1P53564 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC19.73■□□□□ 0.75
Cux1P53564 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Cux1P53564 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC19.73■□□□□ 0.75
Cux1P53564 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC19.73■□□□□ 0.75
Cux1P53564 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC19.73■□□□□ 0.75
Cux1P53564 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC19.73■□□□□ 0.75
Cux1P53564 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cux1P53564 Gm8617-201ENSMUST00000118796 2222 ntBASIC19.73■□□□□ 0.75
Cux1P53564 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC19.73■□□□□ 0.75
Cux1P53564 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC19.73■□□□□ 0.75
Cux1P53564 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cux1P53564 Gm18626-201ENSMUST00000221512 1409 ntBASIC19.73■□□□□ 0.75
Cux1P53564 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cux1P53564 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cux1P53564 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC19.72■□□□□ 0.75
Cux1P53564 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC19.72■□□□□ 0.75
Cux1P53564 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 AY036118-201ENSMUST00000200021 923 ntBASIC19.72■□□□□ 0.75
Cux1P53564 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC19.72■□□□□ 0.75
Cux1P53564 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC19.72■□□□□ 0.75
Cux1P53564 Aprt-ps-201ENSMUST00000212311 505 ntBASIC19.72■□□□□ 0.75
Cux1P53564 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cux1P53564 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cux1P53564 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms