Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Xcl1P47993 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Xcl1P47993 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Xcl1P47993 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Xcl1P47993 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Xcl1P47993 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Xcl1P47993 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Xcl1P47993 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Xcl1P47993 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Xcl1P47993 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Xcl1P47993 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Xcl1P47993 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.42□□□□□ -1.06
Xcl1P47993 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC8.41□□□□□ -1.06
Xcl1P47993 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Xcl1P47993 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Xcl1P47993 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Gm43984-201ENSMUST00000204572 2864 ntBASIC8.41□□□□□ -1.06
Xcl1P47993 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
Xcl1P47993 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Xcl1P47993 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC8.41□□□□□ -1.06
Xcl1P47993 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC8.41□□□□□ -1.06
Xcl1P47993 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Xcl1P47993 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Xcl1P47993 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC8.41□□□□□ -1.06
Xcl1P47993 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Xcl1P47993 Gm8520-201ENSMUST00000186517 868 ntBASIC8.41□□□□□ -1.06
Xcl1P47993 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 AC153881.1-201ENSMUST00000214448 284 ntBASIC8.41□□□□□ -1.06
Xcl1P47993 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC8.41□□□□□ -1.06
Xcl1P47993 AC149294.4-201ENSMUST00000227870 882 ntBASIC8.41□□□□□ -1.06
Xcl1P47993 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
Xcl1P47993 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Xcl1P47993 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Xcl1P47993 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC8.4□□□□□ -1.06
Xcl1P47993 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Xcl1P47993 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC8.4□□□□□ -1.06
Xcl1P47993 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Gm17244-201ENSMUST00000192482 3416 ntBASIC8.4□□□□□ -1.06
Xcl1P47993 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC8.4□□□□□ -1.06
Xcl1P47993 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
Xcl1P47993 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Gm15957-201ENSMUST00000118893 974 ntBASIC8.4□□□□□ -1.06
Xcl1P47993 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Xcl1P47993 Mir7221-201ENSMUST00000184009 72 ntBASIC8.4□□□□□ -1.06
Xcl1P47993 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Xcl1P47993 Gm7063-201ENSMUST00000186840 981 ntBASIC8.4□□□□□ -1.06
Xcl1P47993 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Xcl1P47993 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms