Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC8.8□□□□□ -1
Rpl28P41105 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Rpl28P41105 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Gm7336-201ENSMUST00000107041 1232 ntBASIC8.8□□□□□ -1
Rpl28P41105 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Gm14767-201ENSMUST00000121559 586 ntBASIC8.8□□□□□ -1
Rpl28P41105 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Mir1897-201ENSMUST00000122581 272 ntBASIC8.8□□□□□ -1
Rpl28P41105 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC8.8□□□□□ -1
Rpl28P41105 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC8.8□□□□□ -1
Rpl28P41105 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC8.8□□□□□ -1
Rpl28P41105 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Rpl28P41105 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Gm28630-201ENSMUST00000187806 498 ntBASIC8.8□□□□□ -1
Rpl28P41105 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC8.8□□□□□ -1
Rpl28P41105 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC8.8□□□□□ -1
Rpl28P41105 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC8.8□□□□□ -1
Rpl28P41105 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC8.8□□□□□ -1
Rpl28P41105 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Rpl28P41105 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Rpl28P41105 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC8.8□□□□□ -1
Rpl28P41105 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rpl28P41105 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 CT025624.1-201ENSMUST00000224007 2700 ntBASIC8.8□□□□□ -1
Rpl28P41105 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Adra1a-206ENSMUST00000225182 2337 ntBASIC8.8□□□□□ -1
Rpl28P41105 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Rpl28P41105 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rpl28P41105 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC8.79□□□□□ -1
Rpl28P41105 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Rpl28P41105 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rpl28P41105 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC8.79□□□□□ -1
Rpl28P41105 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Rpl28P41105 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC8.79□□□□□ -1
Rpl28P41105 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Rpl28P41105 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Rpl28P41105 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC8.79□□□□□ -1
Rpl28P41105 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC8.79□□□□□ -1
Rpl28P41105 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC8.79□□□□□ -1
Rpl28P41105 Gm15393-201ENSMUST00000120499 219 ntBASIC8.79□□□□□ -1
Rpl28P41105 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rpl28P41105 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Rpl28P41105 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC8.79□□□□□ -1
Rpl28P41105 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Gm46209-201ENSMUST00000217912 553 ntBASIC8.79□□□□□ -1
Rpl28P41105 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC8.79□□□□□ -1
Rpl28P41105 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Rpl28P41105 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC8.79□□□□□ -1
Rpl28P41105 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rpl28P41105 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms