Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Gm8798-201ENSMUST00000211877 1661 ntBASIC19.15■□□□□ 0.66
Chd1P40201 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Gm26013-201ENSMUST00000104404 119 ntBASIC19.15■□□□□ 0.66
Chd1P40201 Gm12419-201ENSMUST00000116649 636 ntBASIC19.15■□□□□ 0.66
Chd1P40201 Gm11949-201ENSMUST00000117640 372 ntBASIC19.15■□□□□ 0.66
Chd1P40201 Gm11511-201ENSMUST00000118146 540 ntBASIC19.15■□□□□ 0.66
Chd1P40201 Gm13328-201ENSMUST00000120816 1020 ntBASIC19.15■□□□□ 0.66
Chd1P40201 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC19.15■□□□□ 0.66
Chd1P40201 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Chd1P40201 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC19.15■□□□□ 0.66
Chd1P40201 Gm9645-201ENSMUST00000197131 792 ntBASIC19.15■□□□□ 0.66
Chd1P40201 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chd1P40201 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Chd1P40201 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chd1P40201 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Chd1P40201 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Chd1P40201 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1P40201 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC19.15■□□□□ 0.66
Chd1P40201 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd1P40201 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd1P40201 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd1P40201 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Chd1P40201 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Chd1P40201 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC19.14■□□□□ 0.66
Chd1P40201 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC19.14■□□□□ 0.66
Chd1P40201 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC19.14■□□□□ 0.66
Chd1P40201 Gm44421-201ENSMUST00000205064 1221 ntBASIC19.14■□□□□ 0.66
Chd1P40201 Ap3s1-202ENSMUST00000224622 978 ntBASIC19.14■□□□□ 0.66
Chd1P40201 AC136376.2-201ENSMUST00000228819 490 ntBASIC19.14■□□□□ 0.66
Chd1P40201 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC19.14■□□□□ 0.66
Chd1P40201 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd1P40201 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd1P40201 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1P40201 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1P40201 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1P40201 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1P40201 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC19.14■□□□□ 0.65
Chd1P40201 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1P40201 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC19.14■□□□□ 0.65
Chd1P40201 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chd1P40201 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1P40201 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1P40201 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC19.14■□□□□ 0.65
Chd1P40201 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1P40201 Gm15459-201ENSMUST00000117405 1941 ntBASIC19.14■□□□□ 0.65
Chd1P40201 Gm8355-201ENSMUST00000177767 1941 ntBASIC19.14■□□□□ 0.65
Chd1P40201 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1P40201 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC19.14■□□□□ 0.65
Chd1P40201 Gm18367-201ENSMUST00000176139 600 ntBASIC19.14■□□□□ 0.65
Chd1P40201 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Chd1P40201 Gm43778-201ENSMUST00000199438 199 ntBASIC19.14■□□□□ 0.65
Chd1P40201 AC168279.1-201ENSMUST00000214611 382 ntBASIC19.14■□□□□ 0.65
Chd1P40201 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd1P40201 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Chd1P40201 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chd1P40201 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1P40201 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1P40201 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1P40201 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chd1P40201 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1P40201 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1P40201 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chd1P40201 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC19.13■□□□□ 0.65
Chd1P40201 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1P40201 Gm3150-201ENSMUST00000166418 204 ntBASIC19.13■□□□□ 0.65
Chd1P40201 Gm9116-201ENSMUST00000192400 1018 ntBASIC19.13■□□□□ 0.65
Chd1P40201 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC19.13■□□□□ 0.65
Chd1P40201 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1P40201 Gm5705-201ENSMUST00000066241 711 ntBASIC19.13■□□□□ 0.65
Chd1P40201 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chd1P40201 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1P40201 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC19.13■□□□□ 0.65
Chd1P40201 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd1P40201 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chd1P40201 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC19.13■□□□□ 0.65
Chd1P40201 Gm42941-201ENSMUST00000200347 1321 ntBASIC19.13■□□□□ 0.65
Chd1P40201 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1P40201 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Chd1P40201 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1P40201 Gm8531-201ENSMUST00000188319 893 ntBASIC19.12■□□□□ 0.65
Chd1P40201 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC19.12■□□□□ 0.65
Chd1P40201 AC115122.1-201ENSMUST00000224850 1040 ntBASIC19.12■□□□□ 0.65
Chd1P40201 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Chd1P40201 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Chd1P40201 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Chd1P40201 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1P40201 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Chd1P40201 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1P40201 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Chd1P40201 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1P40201 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms