Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.75□□□□□ -0.69
Timp3P39876 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Timp3P39876 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.74□□□□□ -0.69
Timp3P39876 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.74□□□□□ -0.69
Timp3P39876 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.74□□□□□ -0.69
Timp3P39876 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.74□□□□□ -0.69
Timp3P39876 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.74□□□□□ -0.69
Timp3P39876 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.74□□□□□ -0.69
Timp3P39876 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.74□□□□□ -0.69
Timp3P39876 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.74□□□□□ -0.69
Timp3P39876 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.74□□□□□ -0.69
Timp3P39876 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.74□□□□□ -0.69
Timp3P39876 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Timp3P39876 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.73□□□□□ -0.69
Timp3P39876 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Timp3P39876 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.73□□□□□ -0.69
Timp3P39876 Gm22331-201ENSMUST00000158066 136 ntBASIC10.73□□□□□ -0.69
Timp3P39876 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.73□□□□□ -0.69
Timp3P39876 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Timp3P39876 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.73□□□□□ -0.69
Timp3P39876 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.73□□□□□ -0.69
Timp3P39876 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.73□□□□□ -0.69
Timp3P39876 Gm26315-201ENSMUST00000083890 321 ntBASIC10.73□□□□□ -0.69
Timp3P39876 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Timp3P39876 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.73□□□□□ -0.69
Timp3P39876 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Timp3P39876 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Timp3P39876 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Timp3P39876 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms