Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig1P37913 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig1P37913 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Lig1P37913 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lig1P37913 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig1P37913 Gm17208-201ENSMUST00000168388 535 ntBASIC14.87□□□□□ -0.03
Lig1P37913 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.87□□□□□ -0.03
Lig1P37913 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lig1P37913 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.87□□□□□ -0.03
Lig1P37913 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.87□□□□□ -0.03
Lig1P37913 Gm6458-201ENSMUST00000211573 635 ntBASIC14.87□□□□□ -0.03
Lig1P37913 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.87□□□□□ -0.03
Lig1P37913 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig1P37913 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig1P37913 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lig1P37913 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lig1P37913 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Lig1P37913 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.86□□□□□ -0.03
Lig1P37913 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.86□□□□□ -0.03
Lig1P37913 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.86□□□□□ -0.03
Lig1P37913 Gm16570-201ENSMUST00000161951 436 ntBASIC14.86□□□□□ -0.03
Lig1P37913 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.86□□□□□ -0.03
Lig1P37913 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.86□□□□□ -0.03
Lig1P37913 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.86□□□□□ -0.03
Lig1P37913 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Lig1P37913 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lig1P37913 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lig1P37913 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Lig1P37913 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.86□□□□□ -0.03
Lig1P37913 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig1P37913 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Lig1P37913 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.85□□□□□ -0.03
Lig1P37913 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.85□□□□□ -0.03
Lig1P37913 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.85□□□□□ -0.03
Lig1P37913 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lig1P37913 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.85□□□□□ -0.03
Lig1P37913 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.85□□□□□ -0.03
Lig1P37913 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Lig1P37913 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.85□□□□□ -0.03
Lig1P37913 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Lig1P37913 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.85□□□□□ -0.03
Lig1P37913 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.85□□□□□ -0.03
Lig1P37913 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lig1P37913 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.85□□□□□ -0.03
Lig1P37913 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.85□□□□□ -0.03
Lig1P37913 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lig1P37913 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Lig1P37913 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lig1P37913 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.85□□□□□ -0.03
Lig1P37913 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig1P37913 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lig1P37913 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.84□□□□□ -0.03
Lig1P37913 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lig1P37913 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lig1P37913 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lig1P37913 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lig1P37913 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lig1P37913 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Lig1P37913 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lig1P37913 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.84□□□□□ -0.03
Lig1P37913 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lig1P37913 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Lig1P37913 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lig1P37913 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.84□□□□□ -0.03
Lig1P37913 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.84□□□□□ -0.03
Lig1P37913 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lig1P37913 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.84□□□□□ -0.03
Lig1P37913 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Lig1P37913 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.84□□□□□ -0.03
Lig1P37913 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.84□□□□□ -0.03
Lig1P37913 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms