Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.26□□□□□ -0.29
Slc6a13P31649 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.26□□□□□ -0.29
Slc6a13P31649 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.26□□□□□ -0.29
Slc6a13P31649 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.26□□□□□ -0.29
Slc6a13P31649 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.26□□□□□ -0.29
Slc6a13P31649 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Slc6a13P31649 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.26□□□□□ -0.29
Slc6a13P31649 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a13P31649 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Slc6a13P31649 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Slc6a13P31649 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.25□□□□□ -0.29
Slc6a13P31649 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.25□□□□□ -0.29
Slc6a13P31649 Gm16479-201ENSMUST00000121706 932 ntBASIC13.25□□□□□ -0.29
Slc6a13P31649 Gm17150-201ENSMUST00000165577 381 ntBASIC13.25□□□□□ -0.29
Slc6a13P31649 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.25□□□□□ -0.29
Slc6a13P31649 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slc6a13P31649 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Slc6a13P31649 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc6a13P31649 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Slc6a13P31649 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a13P31649 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a13P31649 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a13P31649 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a13P31649 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.24□□□□□ -0.29
Slc6a13P31649 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.24□□□□□ -0.29
Slc6a13P31649 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a13P31649 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.24□□□□□ -0.29
Slc6a13P31649 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.24□□□□□ -0.29
Slc6a13P31649 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Slc6a13P31649 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Slc6a13P31649 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.24□□□□□ -0.29
Slc6a13P31649 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a13P31649 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Slc6a13P31649 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.23□□□□□ -0.29
Slc6a13P31649 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a13P31649 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.23□□□□□ -0.29
Slc6a13P31649 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a13P31649 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a13P31649 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a13P31649 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a13P31649 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Slc6a13P31649 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a13P31649 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms