Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.05□□□□□ -0.48
Nedd8P29595 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.04□□□□□ -0.48
Nedd8P29595 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nedd8P29595 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.04□□□□□ -0.48
Nedd8P29595 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Nedd8P29595 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nedd8P29595 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.04□□□□□ -0.48
Nedd8P29595 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nedd8P29595 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nedd8P29595 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nedd8P29595 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Nedd8P29595 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.03□□□□□ -0.48
Nedd8P29595 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Nedd8P29595 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.03□□□□□ -0.48
Nedd8P29595 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.03□□□□□ -0.48
Nedd8P29595 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Gm10060-201ENSMUST00000212002 111 ntBASIC12.03□□□□□ -0.48
Nedd8P29595 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nedd8P29595 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Nedd8P29595 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.03□□□□□ -0.48
Nedd8P29595 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nedd8P29595 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nedd8P29595 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms