Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp3P28862 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp3P28862 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp3P28862 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp3P28862 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp3P28862 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp3P28862 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp3P28862 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp3P28862 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.96□□□□□ -0.18
Mmp3P28862 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.96□□□□□ -0.18
Mmp3P28862 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.95□□□□□ -0.18
Mmp3P28862 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.95□□□□□ -0.18
Mmp3P28862 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Mmp3P28862 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Mmp3P28862 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.95□□□□□ -0.18
Mmp3P28862 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Mmp3P28862 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.95□□□□□ -0.18
Mmp3P28862 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.95□□□□□ -0.18
Mmp3P28862 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Mmp3P28862 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.95□□□□□ -0.18
Mmp3P28862 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.95□□□□□ -0.18
Mmp3P28862 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Mmp3P28862 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.95□□□□□ -0.18
Mmp3P28862 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp3P28862 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.94□□□□□ -0.18
Mmp3P28862 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Gm11222-201ENSMUST00000119005 738 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.94□□□□□ -0.18
Mmp3P28862 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.94□□□□□ -0.18
Mmp3P28862 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.94□□□□□ -0.18
Mmp3P28862 Gm17376-201ENSMUST00000166016 84 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Gm20482-202ENSMUST00000174729 825 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.94□□□□□ -0.18
Mmp3P28862 Gm5904-201ENSMUST00000210286 865 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Mmp3P28862 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.94□□□□□ -0.18
Mmp3P28862 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp3P28862 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms