Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Clk1P22518 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.27□□□□□ -0.45
Clk1P22518 Gm6218-201ENSMUST00000219812 628 ntBASIC12.27□□□□□ -0.45
Clk1P22518 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Clk1P22518 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Clk1P22518 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Clk1P22518 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Clk1P22518 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.27□□□□□ -0.45
Clk1P22518 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Clk1P22518 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Clk1P22518 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Clk1P22518 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.26□□□□□ -0.45
Clk1P22518 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Clk1P22518 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.26□□□□□ -0.45
Clk1P22518 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Clk1P22518 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.26□□□□□ -0.45
Clk1P22518 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Clk1P22518 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.26□□□□□ -0.45
Clk1P22518 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Gm15823-201ENSMUST00000064305 670 ntBASIC12.26□□□□□ -0.45
Clk1P22518 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.26□□□□□ -0.45
Clk1P22518 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.26□□□□□ -0.45
Clk1P22518 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clk1P22518 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Clk1P22518 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Clk1P22518 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Clk1P22518 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clk1P22518 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Clk1P22518 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.25□□□□□ -0.45
Clk1P22518 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Clk1P22518 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Clk1P22518 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.25□□□□□ -0.45
Clk1P22518 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Clk1P22518 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Clk1P22518 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Clk1P22518 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms