Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.59□□□□□ -0.71
Cdx1P18111 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Cdx1P18111 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cdx1P18111 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.59□□□□□ -0.71
Cdx1P18111 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdx1P18111 Gm27680-201ENSMUST00000184192 160 ntBASIC10.59□□□□□ -0.71
Cdx1P18111 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cdx1P18111 Gm38294-201ENSMUST00000192831 381 ntBASIC10.59□□□□□ -0.71
Cdx1P18111 Ighv8-7-201ENSMUST00000194349 297 ntBASIC10.59□□□□□ -0.71
Cdx1P18111 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.59□□□□□ -0.71
Cdx1P18111 Gm9063-201ENSMUST00000223299 582 ntBASIC10.59□□□□□ -0.71
Cdx1P18111 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cdx1P18111 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cdx1P18111 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.59□□□□□ -0.71
Cdx1P18111 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx1P18111 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.58□□□□□ -0.71
Cdx1P18111 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.58□□□□□ -0.71
Cdx1P18111 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdx1P18111 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdx1P18111 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cdx1P18111 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Cdx1P18111 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cdx1P18111 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.58□□□□□ -0.72
Cdx1P18111 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Gm7730-201ENSMUST00000212486 454 ntBASIC10.58□□□□□ -0.72
Cdx1P18111 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.58□□□□□ -0.72
Cdx1P18111 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cdx1P18111 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cdx1P18111 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdx1P18111 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cdx1P18111 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.58□□□□□ -0.72
Cdx1P18111 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx1P18111 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Cdx1P18111 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdx1P18111 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx1P18111 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms