Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.55□□□□□ -0.4
Cntn1P12960 Gm26927-201ENSMUST00000182385 965 ntBASIC12.55□□□□□ -0.4
Cntn1P12960 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.55□□□□□ -0.4
Cntn1P12960 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.55□□□□□ -0.4
Cntn1P12960 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.55□□□□□ -0.4
Cntn1P12960 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cntn1P12960 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.55□□□□□ -0.4
Cntn1P12960 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn1P12960 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cntn1P12960 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cntn1P12960 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.54□□□□□ -0.4
Cntn1P12960 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cntn1P12960 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.54□□□□□ -0.4
Cntn1P12960 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Gm28693-202ENSMUST00000190758 331 ntBASIC12.54□□□□□ -0.4
Cntn1P12960 Gm6458-201ENSMUST00000211573 635 ntBASIC12.54□□□□□ -0.4
Cntn1P12960 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Cntn1P12960 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cntn1P12960 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Cntn1P12960 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.54□□□□□ -0.4
Cntn1P12960 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.54□□□□□ -0.4
Cntn1P12960 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn1P12960 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.53□□□□□ -0.4
Cntn1P12960 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cntn1P12960 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cntn1P12960 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.53□□□□□ -0.4
Cntn1P12960 Gm11978-201ENSMUST00000122315 466 ntBASIC12.53□□□□□ -0.4
Cntn1P12960 Gm6007-201ENSMUST00000208170 823 ntBASIC12.53□□□□□ -0.4
Cntn1P12960 Gm45880-201ENSMUST00000213041 853 ntBASIC12.53□□□□□ -0.4
Cntn1P12960 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.53□□□□□ -0.4
Cntn1P12960 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn1P12960 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cntn1P12960 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms