Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl1P12850 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl1P12850 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl1P12850 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl1P12850 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl1P12850 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl1P12850 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cxcl1P12850 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl1P12850 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.83□□□□□ -0.68
Cxcl1P12850 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl1P12850 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl1P12850 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Cxcl1P12850 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl1P12850 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl1P12850 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.82□□□□□ -0.68
Cxcl1P12850 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.82□□□□□ -0.68
Cxcl1P12850 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl1P12850 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.82□□□□□ -0.68
Cxcl1P12850 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.82□□□□□ -0.68
Cxcl1P12850 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Cxcl1P12850 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Gm22175-201ENSMUST00000175007 78 ntBASIC10.82□□□□□ -0.68
Cxcl1P12850 Gm43094-201ENSMUST00000196549 921 ntBASIC10.82□□□□□ -0.68
Cxcl1P12850 Gm43514-201ENSMUST00000198852 424 ntBASIC10.82□□□□□ -0.68
Cxcl1P12850 Gm9063-201ENSMUST00000223299 582 ntBASIC10.82□□□□□ -0.68
Cxcl1P12850 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.82□□□□□ -0.68
Cxcl1P12850 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.82□□□□□ -0.68
Cxcl1P12850 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl1P12850 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.82□□□□□ -0.68
Cxcl1P12850 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl1P12850 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.81□□□□□ -0.68
Cxcl1P12850 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.81□□□□□ -0.68
Cxcl1P12850 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.81□□□□□ -0.68
Cxcl1P12850 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.81□□□□□ -0.68
Cxcl1P12850 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms