Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
Col1a1P11087 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col1a1P11087 AY036118-201ENSMUST00000200021 923 ntBASIC15.12■□□□□ 0.01
Col1a1P11087 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.12■□□□□ 0.01
Col1a1P11087 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a1P11087 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.12■□□□□ 0.01
Col1a1P11087 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a1P11087 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a1P11087 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a1P11087 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a1P11087 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.11■□□□□ 0.01
Col1a1P11087 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
Col1a1P11087 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.11■□□□□ 0.01
Col1a1P11087 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Gm11628-201ENSMUST00000117568 171 ntBASIC15.11■□□□□ 0.01
Col1a1P11087 Gm5616-201ENSMUST00000165252 384 ntBASIC15.11■□□□□ 0.01
Col1a1P11087 Gm8741-201ENSMUST00000174736 384 ntBASIC15.11■□□□□ 0.01
Col1a1P11087 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.11■□□□□ 0.01
Col1a1P11087 Gm8285-201ENSMUST00000208293 759 ntBASIC15.11■□□□□ 0.01
Col1a1P11087 Gm5369-201ENSMUST00000217499 588 ntBASIC15.11■□□□□ 0.01
Col1a1P11087 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.11■□□□□ 0.01
Col1a1P11087 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a1P11087 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col1a1P11087 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Gm12314-201ENSMUST00000118104 538 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.1■□□□□ 0.01
Col1a1P11087 Gm29615-201ENSMUST00000185371 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm28224-201ENSMUST00000186078 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm29001-201ENSMUST00000186177 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm28292-201ENSMUST00000186593 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm28101-201ENSMUST00000187608 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm29076-201ENSMUST00000187689 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm28302-201ENSMUST00000187931 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm28646-201ENSMUST00000188220 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm28205-201ENSMUST00000189177 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm29032-201ENSMUST00000189797 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm28695-201ENSMUST00000190300 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Gm37448-201ENSMUST00000192795 697 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Gm44551-201ENSMUST00000208804 171 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.1■□□□□ 0.01
Col1a1P11087 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.1■□□□□ 0.01
Col1a1P11087 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Ntng1-201ENSMUST00000051253 327 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.1■□□□□ 0.01
Col1a1P11087 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Col1a1P11087 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.1■□□□□ 0.01
Col1a1P11087 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col1a1P11087 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.09■□□□□ 0.01
Col1a1P11087 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col1a1P11087 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col1a1P11087 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col1a1P11087 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col1a1P11087 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Col1a1P11087 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col1a1P11087 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col1a1P11087 Gm13315-201ENSMUST00000120376 991 ntBASIC15.09■□□□□ 0.01
Col1a1P11087 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col1a1P11087 Gm27627-201ENSMUST00000183644 150 ntBASIC15.09■□□□□ 0.01
Col1a1P11087 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.09■□□□□ 0.01
Col1a1P11087 Gm45219-201ENSMUST00000205602 465 ntBASIC15.09■□□□□ 0.01
Col1a1P11087 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Col1a1P11087 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col1a1P11087 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col1a1P11087 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col1a1P11087 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.09■□□□□ 0.01
Col1a1P11087 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms