Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc8P09025 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc8P09025 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc8P09025 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc8P09025 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxc8P09025 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc8P09025 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc8P09025 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc8P09025 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc8P09025 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc8P09025 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc8P09025 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Hoxc8P09025 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.81□□□□□ -0.2
Hoxc8P09025 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Gm37986-201ENSMUST00000193285 383 ntBASIC13.81□□□□□ -0.2
Hoxc8P09025 Gm19208-201ENSMUST00000213861 912 ntBASIC13.81□□□□□ -0.2
Hoxc8P09025 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.81□□□□□ -0.2
Hoxc8P09025 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Gm10312-201ENSMUST00000078515 489 ntBASIC13.81□□□□□ -0.2
Hoxc8P09025 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc8P09025 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.81□□□□□ -0.2
Hoxc8P09025 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc8P09025 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc8P09025 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc8P09025 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc8P09025 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc8P09025 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc8P09025 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc8P09025 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Gm23200-201ENSMUST00000104379 132 ntBASIC13.8□□□□□ -0.2
Hoxc8P09025 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.8□□□□□ -0.2
Hoxc8P09025 Gm6963-201ENSMUST00000147879 379 ntBASIC13.8□□□□□ -0.2
Hoxc8P09025 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc8P09025 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Mir6927-201ENSMUST00000184494 71 ntBASIC13.8□□□□□ -0.2
Hoxc8P09025 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.8□□□□□ -0.2
Hoxc8P09025 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc8P09025 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc8P09025 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.8□□□□□ -0.2
Hoxc8P09025 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.8□□□□□ -0.2
Hoxc8P09025 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc8P09025 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc8P09025 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc8P09025 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc8P09025 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxc8P09025 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.79□□□□□ -0.2
Hoxc8P09025 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hoxc8P09025 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxc8P09025 Gm12566-201ENSMUST00000121479 359 ntBASIC13.79□□□□□ -0.2
Hoxc8P09025 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Gm28882-201ENSMUST00000185504 314 ntBASIC13.79□□□□□ -0.2
Hoxc8P09025 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc8P09025 Gm7003-201ENSMUST00000195089 312 ntBASIC13.79□□□□□ -0.2
Hoxc8P09025 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms