Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxa4P06798 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Gm16379-201ENSMUST00000161469 348 ntBASIC12.86□□□□□ -0.35
Hoxa4P06798 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.86□□□□□ -0.35
Hoxa4P06798 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Gm37424-201ENSMUST00000191727 561 ntBASIC12.86□□□□□ -0.35
Hoxa4P06798 Gm8762-201ENSMUST00000193486 339 ntBASIC12.86□□□□□ -0.35
Hoxa4P06798 Gm32025-201ENSMUST00000217960 307 ntBASIC12.86□□□□□ -0.35
Hoxa4P06798 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.86□□□□□ -0.35
Hoxa4P06798 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hoxa4P06798 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.86□□□□□ -0.35
Hoxa4P06798 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hoxa4P06798 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.85□□□□□ -0.35
Hoxa4P06798 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Gm25261-201ENSMUST00000157416 134 ntBASIC12.85□□□□□ -0.35
Hoxa4P06798 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Gm25927-201ENSMUST00000175058 117 ntBASIC12.85□□□□□ -0.35
Hoxa4P06798 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.85□□□□□ -0.35
Hoxa4P06798 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.85□□□□□ -0.35
Hoxa4P06798 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.85□□□□□ -0.35
Hoxa4P06798 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.85□□□□□ -0.35
Hoxa4P06798 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.85□□□□□ -0.35
Hoxa4P06798 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Hoxa4P06798 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms