Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm4271-201ENSMUST00000174444 973 ntBASIC10.98□□□□□ -0.65
Hoxa3P02831 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gm45841-201ENSMUST00000207700 164 ntBASIC10.98□□□□□ -0.65
Hoxa3P02831 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.98□□□□□ -0.65
Hoxa3P02831 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Hoxa3P02831 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxa3P02831 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm14350-201ENSMUST00000116642 640 ntBASIC10.97□□□□□ -0.65
Hoxa3P02831 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxa3P02831 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm27514-201ENSMUST00000183692 110 ntBASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm27682-201ENSMUST00000183930 110 ntBASIC10.97□□□□□ -0.65
Hoxa3P02831 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm42693-201ENSMUST00000196779 631 ntBASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.97□□□□□ -0.65
Hoxa3P02831 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.97□□□□□ -0.65
Hoxa3P02831 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm10478-201ENSMUST00000084451 396 ntBASIC10.97□□□□□ -0.65
Hoxa3P02831 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.97□□□□□ -0.65
Hoxa3P02831 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.97□□□□□ -0.65
Hoxa3P02831 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxa3P02831 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxa3P02831 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Hoxa3P02831 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.96□□□□□ -0.65
Hoxa3P02831 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Hoxa3P02831 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Hoxa3P02831 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.96□□□□□ -0.65
Hoxa3P02831 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.96□□□□□ -0.65
Hoxa3P02831 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxa3P02831 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.96□□□□□ -0.65
Hoxa3P02831 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.96□□□□□ -0.65
Hoxa3P02831 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms