Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Col4a1P02463 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.74■□□□□ 0.11
Col4a1P02463 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.74■□□□□ 0.11
Col4a1P02463 Gm5616-201ENSMUST00000165252 384 ntBASIC15.74■□□□□ 0.11
Col4a1P02463 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Gm8741-201ENSMUST00000174736 384 ntBASIC15.74■□□□□ 0.11
Col4a1P02463 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.74■□□□□ 0.11
Col4a1P02463 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.74■□□□□ 0.11
Col4a1P02463 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC15.74■□□□□ 0.11
Col4a1P02463 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col4a1P02463 Gm10076-201ENSMUST00000073238 384 ntBASIC15.74■□□□□ 0.11
Col4a1P02463 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Col4a1P02463 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Col4a1P02463 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Col4a1P02463 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col4a1P02463 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Gm13045-201ENSMUST00000119019 712 ntBASIC15.73■□□□□ 0.11
Col4a1P02463 Gm6039-201ENSMUST00000121667 1250 ntBASIC15.73■□□□□ 0.11
Col4a1P02463 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.73■□□□□ 0.11
Col4a1P02463 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC15.73■□□□□ 0.11
Col4a1P02463 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 AU022133-201ENSMUST00000200601 873 ntBASIC15.73■□□□□ 0.11
Col4a1P02463 Gm44126-201ENSMUST00000204831 514 ntBASIC15.73■□□□□ 0.11
Col4a1P02463 Gm7848-201ENSMUST00000210739 718 ntBASIC15.73■□□□□ 0.11
Col4a1P02463 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.73■□□□□ 0.11
Col4a1P02463 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.73■□□□□ 0.11
Col4a1P02463 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Col4a1P02463 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Col4a1P02463 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Col4a1P02463 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC15.73■□□□□ 0.11
Col4a1P02463 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.73■□□□□ 0.11
Col4a1P02463 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.73■□□□□ 0.11
Col4a1P02463 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.73■□□□□ 0.11
Col4a1P02463 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.73■□□□□ 0.11
Col4a1P02463 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Col4a1P02463 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col4a1P02463 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col4a1P02463 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.72■□□□□ 0.11
Col4a1P02463 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.72■□□□□ 0.11
Col4a1P02463 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.72■□□□□ 0.11
Col4a1P02463 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Col4a1P02463 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.72■□□□□ 0.11
Col4a1P02463 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.72■□□□□ 0.11
Col4a1P02463 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.72■□□□□ 0.11
Col4a1P02463 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col4a1P02463 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col4a1P02463 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.72■□□□□ 0.11
Col4a1P02463 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.72■□□□□ 0.11
Col4a1P02463 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col4a1P02463 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a1P02463 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a1P02463 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a1P02463 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a1P02463 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a1P02463 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a1P02463 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a1P02463 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.71■□□□□ 0.11
Col4a1P02463 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.71■□□□□ 0.11
Col4a1P02463 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a1P02463 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col4a1P02463 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.71■□□□□ 0.11
Col4a1P02463 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.71■□□□□ 0.11
Col4a1P02463 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a1P02463 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms