Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.54□□□□□ -0.88
TcraP01849 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
TcraP01849 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
TcraP01849 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.54□□□□□ -0.88
TcraP01849 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
TcraP01849 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
TcraP01849 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
TcraP01849 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.54□□□□□ -0.88
TcraP01849 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.53□□□□□ -0.88
TcraP01849 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.53□□□□□ -0.88
TcraP01849 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
TcraP01849 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
TcraP01849 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
TcraP01849 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.53□□□□□ -0.88
TcraP01849 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.53□□□□□ -0.88
TcraP01849 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
TcraP01849 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.53□□□□□ -0.88
TcraP01849 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.53□□□□□ -0.88
TcraP01849 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.53□□□□□ -0.88
TcraP01849 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
TcraP01849 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
TcraP01849 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
TcraP01849 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
TcraP01849 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
TcraP01849 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TcraP01849 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
TcraP01849 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.52□□□□□ -0.88
TcraP01849 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
TcraP01849 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
TcraP01849 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
TcraP01849 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.52□□□□□ -0.88
TcraP01849 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
TcraP01849 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.88
TcraP01849 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.52□□□□□ -0.88
TcraP01849 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.88
TcraP01849 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
TcraP01849 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms