Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hcn1O88704 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hcn1O88704 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Hcn1O88704 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.54□□□□□ -0.4
Hcn1O88704 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hcn1O88704 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hcn1O88704 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.54□□□□□ -0.4
Hcn1O88704 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hcn1O88704 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.54□□□□□ -0.4
Hcn1O88704 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hcn1O88704 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.54□□□□□ -0.4
Hcn1O88704 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hcn1O88704 Gm5161-201ENSMUST00000075243 853 ntBASIC12.54□□□□□ -0.4
Hcn1O88704 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hcn1O88704 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.54□□□□□ -0.4
Hcn1O88704 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Hcn1O88704 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcn1O88704 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.53□□□□□ -0.4
Hcn1O88704 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.53□□□□□ -0.4
Hcn1O88704 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.53□□□□□ -0.4
Hcn1O88704 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.53□□□□□ -0.4
Hcn1O88704 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.53□□□□□ -0.4
Hcn1O88704 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.53□□□□□ -0.4
Hcn1O88704 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hcn1O88704 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Gm24447-201ENSMUST00000083977 338 ntBASIC12.53□□□□□ -0.4
Hcn1O88704 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hcn1O88704 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.53□□□□□ -0.4
Hcn1O88704 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcn1O88704 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hcn1O88704 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hcn1O88704 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hcn1O88704 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hcn1O88704 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.52□□□□□ -0.4
Hcn1O88704 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hcn1O88704 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hcn1O88704 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hcn1O88704 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Hcn1O88704 Paupar-201ENSMUST00000194826 3482 ntBASIC12.52□□□□□ -0.4
Hcn1O88704 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.52□□□□□ -0.4
Hcn1O88704 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hcn1O88704 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hcn1O88704 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hcn1O88704 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Hcn1O88704 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.52□□□□□ -0.41
Hcn1O88704 Gm13689-201ENSMUST00000119360 685 ntBASIC12.52□□□□□ -0.41
Hcn1O88704 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hcn1O88704 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hcn1O88704 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.52□□□□□ -0.41
Hcn1O88704 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms