Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.83□□□□□ -0.36
ClppO88696 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.83□□□□□ -0.36
ClppO88696 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ClppO88696 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.83□□□□□ -0.36
ClppO88696 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.83□□□□□ -0.36
ClppO88696 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ClppO88696 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.83□□□□□ -0.36
ClppO88696 Gm37424-201ENSMUST00000191727 561 ntBASIC12.83□□□□□ -0.36
ClppO88696 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.83□□□□□ -0.36
ClppO88696 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.83□□□□□ -0.36
ClppO88696 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ClppO88696 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
ClppO88696 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ClppO88696 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.83□□□□□ -0.36
ClppO88696 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
ClppO88696 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ClppO88696 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ClppO88696 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.82□□□□□ -0.36
ClppO88696 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.82□□□□□ -0.36
ClppO88696 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.82□□□□□ -0.36
ClppO88696 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ClppO88696 Gm10156-201ENSMUST00000122364 462 ntBASIC12.82□□□□□ -0.36
ClppO88696 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.82□□□□□ -0.36
ClppO88696 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.82□□□□□ -0.36
ClppO88696 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ClppO88696 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ClppO88696 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.82□□□□□ -0.36
ClppO88696 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.82□□□□□ -0.36
ClppO88696 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ClppO88696 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ClppO88696 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.81□□□□□ -0.36
ClppO88696 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.81□□□□□ -0.36
ClppO88696 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ClppO88696 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
ClppO88696 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ClppO88696 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.81□□□□□ -0.36
ClppO88696 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.81□□□□□ -0.36
ClppO88696 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.81□□□□□ -0.36
ClppO88696 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.81□□□□□ -0.36
ClppO88696 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
ClppO88696 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms