Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.6□□□□□ -0.23
Ttc3O88196 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Ttc3O88196 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.6□□□□□ -0.23
Ttc3O88196 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ttc3O88196 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.6□□□□□ -0.23
Ttc3O88196 Gm14109-201ENSMUST00000118814 309 ntBASIC13.6□□□□□ -0.23
Ttc3O88196 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.6□□□□□ -0.23
Ttc3O88196 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.6□□□□□ -0.23
Ttc3O88196 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.6□□□□□ -0.23
Ttc3O88196 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ttc3O88196 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ttc3O88196 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.59□□□□□ -0.23
Ttc3O88196 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.59□□□□□ -0.23
Ttc3O88196 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ttc3O88196 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ttc3O88196 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ttc3O88196 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Gm11531-201ENSMUST00000117614 555 ntBASIC13.59□□□□□ -0.23
Ttc3O88196 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.59□□□□□ -0.23
Ttc3O88196 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.59□□□□□ -0.23
Ttc3O88196 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.59□□□□□ -0.23
Ttc3O88196 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.59□□□□□ -0.23
Ttc3O88196 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.59□□□□□ -0.23
Ttc3O88196 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ttc3O88196 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ttc3O88196 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.59□□□□□ -0.23
Ttc3O88196 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ttc3O88196 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Ttc3O88196 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ttc3O88196 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ttc3O88196 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ttc3O88196 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Ttc3O88196 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Ttc3O88196 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ttc3O88196 Mir3102-201ENSMUST00000175555 104 ntBASIC13.58□□□□□ -0.24
Ttc3O88196 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ttc3O88196 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.58□□□□□ -0.24
Ttc3O88196 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.58□□□□□ -0.24
Ttc3O88196 Gm31256-201ENSMUST00000194705 506 ntBASIC13.58□□□□□ -0.24
Ttc3O88196 Gm38317-201ENSMUST00000195564 343 ntBASIC13.58□□□□□ -0.24
Ttc3O88196 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.58□□□□□ -0.24
Ttc3O88196 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.58□□□□□ -0.24
Ttc3O88196 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.58□□□□□ -0.24
Ttc3O88196 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ttc3O88196 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ttc3O88196 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ttc3O88196 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.58□□□□□ -0.24
Ttc3O88196 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms