Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pknox1O70477 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Gm3365-201ENSMUST00000216296 1480 ntBASIC13□□□□□ -0.33
Pknox1O70477 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13□□□□□ -0.33
Pknox1O70477 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Pknox1O70477 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pknox1O70477 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13□□□□□ -0.33
Pknox1O70477 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13□□□□□ -0.33
Pknox1O70477 Gm42612-201ENSMUST00000197986 623 ntBASIC13□□□□□ -0.33
Pknox1O70477 Gm43170-201ENSMUST00000199827 612 ntBASIC13□□□□□ -0.33
Pknox1O70477 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13□□□□□ -0.33
Pknox1O70477 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13□□□□□ -0.33
Pknox1O70477 Gm19220-201ENSMUST00000222682 803 ntBASIC13□□□□□ -0.33
Pknox1O70477 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13□□□□□ -0.33
Pknox1O70477 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pknox1O70477 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Rn7sk-201ENSMUST00000083103 331 ntBASIC13□□□□□ -0.33
Pknox1O70477 Gm26315-201ENSMUST00000083890 321 ntBASIC13□□□□□ -0.33
Pknox1O70477 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Pknox1O70477 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pknox1O70477 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pknox1O70477 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.99□□□□□ -0.33
Pknox1O70477 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Pknox1O70477 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pknox1O70477 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.99□□□□□ -0.33
Pknox1O70477 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Pknox1O70477 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.99□□□□□ -0.33
Pknox1O70477 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.99□□□□□ -0.33
Pknox1O70477 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pknox1O70477 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.99□□□□□ -0.33
Pknox1O70477 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.99□□□□□ -0.33
Pknox1O70477 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.99□□□□□ -0.33
Pknox1O70477 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.99□□□□□ -0.33
Pknox1O70477 Gm20949-201ENSMUST00000206478 952 ntBASIC12.99□□□□□ -0.33
Pknox1O70477 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.99□□□□□ -0.33
Pknox1O70477 Gm7730-201ENSMUST00000212486 454 ntBASIC12.99□□□□□ -0.33
Pknox1O70477 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.99□□□□□ -0.33
Pknox1O70477 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pknox1O70477 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.99□□□□□ -0.33
Pknox1O70477 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pknox1O70477 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pknox1O70477 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pknox1O70477 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.98□□□□□ -0.33
Pknox1O70477 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.98□□□□□ -0.33
Pknox1O70477 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pknox1O70477 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pknox1O70477 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pknox1O70477 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pknox1O70477 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pknox1O70477 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pknox1O70477 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pknox1O70477 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pknox1O70477 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pknox1O70477 Gm15371-201ENSMUST00000117057 784 ntBASIC12.98□□□□□ -0.33
Pknox1O70477 Gm6447-201ENSMUST00000118905 835 ntBASIC12.98□□□□□ -0.33
Pknox1O70477 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.98□□□□□ -0.33
Pknox1O70477 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.98□□□□□ -0.33
Pknox1O70477 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.98□□□□□ -0.33
Pknox1O70477 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pknox1O70477 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms