Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pdlim1O70400 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Pdlim1O70400 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.94□□□□□ -0.34
Pdlim1O70400 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.94□□□□□ -0.34
Pdlim1O70400 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pdlim1O70400 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pdlim1O70400 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pdlim1O70400 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pdlim1O70400 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Pdlim1O70400 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.93□□□□□ -0.34
Pdlim1O70400 Gm43818-201ENSMUST00000200605 466 ntBASIC12.93□□□□□ -0.34
Pdlim1O70400 Gm6266-201ENSMUST00000203844 806 ntBASIC12.93□□□□□ -0.34
Pdlim1O70400 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.93□□□□□ -0.34
Pdlim1O70400 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pdlim1O70400 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Pdlim1O70400 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Pdlim1O70400 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.93□□□□□ -0.34
Pdlim1O70400 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim1O70400 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pdlim1O70400 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pdlim1O70400 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pdlim1O70400 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.92□□□□□ -0.34
Pdlim1O70400 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.92□□□□□ -0.34
Pdlim1O70400 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Gm26927-201ENSMUST00000182385 965 ntBASIC12.92□□□□□ -0.34
Pdlim1O70400 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.92□□□□□ -0.34
Pdlim1O70400 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.92□□□□□ -0.34
Pdlim1O70400 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.92□□□□□ -0.34
Pdlim1O70400 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Gm10146-201ENSMUST00000072739 309 ntBASIC12.92□□□□□ -0.34
Pdlim1O70400 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Pdlim1O70400 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.92□□□□□ -0.34
Pdlim1O70400 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pdlim1O70400 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdlim1O70400 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.91□□□□□ -0.34
Pdlim1O70400 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pdlim1O70400 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms