Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.15□□□□□ -0.46
BckdkO55028 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Gm9899-201ENSMUST00000065519 555 ntBASIC12.15□□□□□ -0.46
BckdkO55028 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.15□□□□□ -0.46
BckdkO55028 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.15□□□□□ -0.46
BckdkO55028 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BckdkO55028 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
BckdkO55028 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.14□□□□□ -0.47
BckdkO55028 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.14□□□□□ -0.47
BckdkO55028 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.14□□□□□ -0.47
BckdkO55028 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.14□□□□□ -0.47
BckdkO55028 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
BckdkO55028 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
BckdkO55028 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
BckdkO55028 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
BckdkO55028 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Mir1938-201ENSMUST00000158746 100 ntBASIC12.14□□□□□ -0.47
BckdkO55028 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.14□□□□□ -0.47
BckdkO55028 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.14□□□□□ -0.47
BckdkO55028 Gm45841-201ENSMUST00000207700 164 ntBASIC12.14□□□□□ -0.47
BckdkO55028 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
BckdkO55028 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.14□□□□□ -0.47
BckdkO55028 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.14□□□□□ -0.47
BckdkO55028 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
BckdkO55028 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BckdkO55028 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.13□□□□□ -0.47
BckdkO55028 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
BckdkO55028 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
BckdkO55028 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.13□□□□□ -0.47
BckdkO55028 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
BckdkO55028 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BckdkO55028 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BckdkO55028 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Gm12742-201ENSMUST00000117326 410 ntBASIC12.13□□□□□ -0.47
BckdkO55028 Gm15770-201ENSMUST00000117498 584 ntBASIC12.13□□□□□ -0.47
BckdkO55028 Gm13612-201ENSMUST00000119276 390 ntBASIC12.13□□□□□ -0.47
BckdkO55028 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.13□□□□□ -0.47
BckdkO55028 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.13□□□□□ -0.47
BckdkO55028 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.13□□□□□ -0.47
BckdkO55028 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.13□□□□□ -0.47
BckdkO55028 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
BckdkO55028 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.13□□□□□ -0.47
BckdkO55028 Gm29649-201ENSMUST00000185649 419 ntBASIC12.13□□□□□ -0.47
BckdkO55028 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.13□□□□□ -0.47
BckdkO55028 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.13□□□□□ -0.47
BckdkO55028 Gm18473-201ENSMUST00000220543 868 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms