Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf13O54965 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rnf13O54965 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rnf13O54965 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf13O54965 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf13O54965 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf13O54965 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf13O54965 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.86□□□□□ -0.51
Rnf13O54965 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.86□□□□□ -0.51
Rnf13O54965 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rnf13O54965 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf13O54965 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf13O54965 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.86□□□□□ -0.51
Rnf13O54965 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf13O54965 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf13O54965 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.86□□□□□ -0.51
Rnf13O54965 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.86□□□□□ -0.51
Rnf13O54965 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf13O54965 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf13O54965 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.85□□□□□ -0.51
Rnf13O54965 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf13O54965 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rnf13O54965 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf13O54965 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf13O54965 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Rnf13O54965 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf13O54965 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf13O54965 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Rnf13O54965 Gm4875-201ENSMUST00000118257 786 ntBASIC11.85□□□□□ -0.51
Rnf13O54965 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf13O54965 Gm37935-201ENSMUST00000192012 982 ntBASIC11.85□□□□□ -0.51
Rnf13O54965 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Gm5161-201ENSMUST00000075243 853 ntBASIC11.85□□□□□ -0.51
Rnf13O54965 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf13O54965 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf13O54965 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf13O54965 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf13O54965 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.84□□□□□ -0.51
Rnf13O54965 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf13O54965 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf13O54965 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Rnf13O54965 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Rnf13O54965 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf13O54965 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf13O54965 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf13O54965 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf13O54965 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf13O54965 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf13O54965 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf13O54965 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.84□□□□□ -0.51
Rnf13O54965 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms