Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.27□□□□□ -0.29
Limk2O54785 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Limk2O54785 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Limk2O54785 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Limk2O54785 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.27□□□□□ -0.29
Limk2O54785 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Limk2O54785 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Limk2O54785 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Limk2O54785 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Limk2O54785 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Limk2O54785 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.27□□□□□ -0.29
Limk2O54785 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Limk2O54785 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Limk2O54785 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Limk2O54785 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Limk2O54785 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Limk2O54785 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.26□□□□□ -0.29
Limk2O54785 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.26□□□□□ -0.29
Limk2O54785 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Limk2O54785 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.26□□□□□ -0.29
Limk2O54785 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Gm27331-201ENSMUST00000183705 60 ntBASIC13.26□□□□□ -0.29
Limk2O54785 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Gm29705-201ENSMUST00000212598 474 ntBASIC13.26□□□□□ -0.29
Limk2O54785 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.26□□□□□ -0.29
Limk2O54785 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Limk2O54785 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.26□□□□□ -0.29
Limk2O54785 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Limk2O54785 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Limk2O54785 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.25□□□□□ -0.29
Limk2O54785 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Limk2O54785 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.25□□□□□ -0.29
Limk2O54785 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Limk2O54785 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.25□□□□□ -0.29
Limk2O54785 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Limk2O54785 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.25□□□□□ -0.29
Limk2O54785 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.25□□□□□ -0.29
Limk2O54785 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.25□□□□□ -0.29
Limk2O54785 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.25□□□□□ -0.29
Limk2O54785 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.25□□□□□ -0.29
Limk2O54785 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Limk2O54785 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Limk2O54785 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Limk2O54785 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Limk2O54785 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.24□□□□□ -0.29
Limk2O54785 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Limk2O54785 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms