Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Efnb3O35393 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.34□□□□□ -0.75
Efnb3O35393 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.34□□□□□ -0.75
Efnb3O35393 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.34□□□□□ -0.75
Efnb3O35393 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Efnb3O35393 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.34□□□□□ -0.75
Efnb3O35393 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.34□□□□□ -0.75
Efnb3O35393 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.34□□□□□ -0.75
Efnb3O35393 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Gm12585-201ENSMUST00000117307 290 ntBASIC10.34□□□□□ -0.75
Efnb3O35393 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.34□□□□□ -0.75
Efnb3O35393 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.34□□□□□ -0.75
Efnb3O35393 Gm14767-201ENSMUST00000121559 586 ntBASIC10.34□□□□□ -0.75
Efnb3O35393 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.34□□□□□ -0.75
Efnb3O35393 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Efnb3O35393 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.34□□□□□ -0.75
Efnb3O35393 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.34□□□□□ -0.75
Efnb3O35393 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.34□□□□□ -0.75
Efnb3O35393 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.34□□□□□ -0.75
Efnb3O35393 Gm17330-201ENSMUST00000221047 165 ntBASIC10.34□□□□□ -0.75
Efnb3O35393 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Efnb3O35393 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.34□□□□□ -0.75
Efnb3O35393 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Efnb3O35393 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Efnb3O35393 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Efnb3O35393 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Efnb3O35393 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Efnb3O35393 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
Efnb3O35393 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Efnb3O35393 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.33□□□□□ -0.76
Efnb3O35393 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Efnb3O35393 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Gm13453-201ENSMUST00000118708 357 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Gm27533-201ENSMUST00000183800 152 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Gm27680-201ENSMUST00000184192 160 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Gm46209-201ENSMUST00000217912 553 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.33□□□□□ -0.76
Efnb3O35393 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms