Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.68□□□□□ -0.54
Alx4O35137 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Gm26464-201ENSMUST00000157094 305 ntBASIC11.68□□□□□ -0.54
Alx4O35137 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.68□□□□□ -0.54
Alx4O35137 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.68□□□□□ -0.54
Alx4O35137 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.68□□□□□ -0.54
Alx4O35137 Gm9063-201ENSMUST00000223299 582 ntBASIC11.68□□□□□ -0.54
Alx4O35137 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.68□□□□□ -0.54
Alx4O35137 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.68□□□□□ -0.54
Alx4O35137 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.67□□□□□ -0.54
Alx4O35137 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.67□□□□□ -0.54
Alx4O35137 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Alx4O35137 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Alx4O35137 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.67□□□□□ -0.54
Alx4O35137 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Alx4O35137 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Alx4O35137 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.67□□□□□ -0.54
Alx4O35137 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.67□□□□□ -0.54
Alx4O35137 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Alx4O35137 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.67□□□□□ -0.54
Alx4O35137 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.67□□□□□ -0.54
Alx4O35137 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.67□□□□□ -0.54
Alx4O35137 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Gm19078-201ENSMUST00000206311 727 ntBASIC11.67□□□□□ -0.54
Alx4O35137 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.67□□□□□ -0.54
Alx4O35137 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Alx4O35137 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.67□□□□□ -0.54
Alx4O35137 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Alx4O35137 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.67□□□□□ -0.54
Alx4O35137 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Alx4O35137 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Alx4O35137 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Alx4O35137 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Alx4O35137 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Alx4O35137 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Alx4O35137 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.66□□□□□ -0.54
Alx4O35137 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Alx4O35137 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.66□□□□□ -0.54
Alx4O35137 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Alx4O35137 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Alx4O35137 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Alx4O35137 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Alx4O35137 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Alx4O35137 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Alx4O35137 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.66□□□□□ -0.54
Alx4O35137 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Alx4O35137 Gm6447-201ENSMUST00000118905 835 ntBASIC11.66□□□□□ -0.54
Alx4O35137 Gm11524-201ENSMUST00000119349 807 ntBASIC11.66□□□□□ -0.54
Alx4O35137 Gm6736-201ENSMUST00000166583 948 ntBASIC11.66□□□□□ -0.54
Alx4O35137 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms