Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.61□□□□□ -0.23
Ebf3O08791 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.61□□□□□ -0.23
Ebf3O08791 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.61□□□□□ -0.23
Ebf3O08791 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ebf3O08791 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.61□□□□□ -0.23
Ebf3O08791 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf3O08791 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ebf3O08791 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.6□□□□□ -0.23
Ebf3O08791 Gm44364-201ENSMUST00000198368 141 ntBASIC13.6□□□□□ -0.23
Ebf3O08791 Olfr284-202ENSMUST00000206647 966 ntBASIC13.6□□□□□ -0.23
Ebf3O08791 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ebf3O08791 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ebf3O08791 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Ebf3O08791 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.6□□□□□ -0.23
Ebf3O08791 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.6□□□□□ -0.23
Ebf3O08791 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Ebf3O08791 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ebf3O08791 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ebf3O08791 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.6□□□□□ -0.23
Ebf3O08791 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf3O08791 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Ebf3O08791 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Gm8805-201ENSMUST00000117848 313 ntBASIC13.59□□□□□ -0.23
Ebf3O08791 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.59□□□□□ -0.23
Ebf3O08791 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.59□□□□□ -0.23
Ebf3O08791 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.59□□□□□ -0.23
Ebf3O08791 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.59□□□□□ -0.23
Ebf3O08791 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.59□□□□□ -0.23
Ebf3O08791 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.59□□□□□ -0.23
Ebf3O08791 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.59□□□□□ -0.23
Ebf3O08791 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.59□□□□□ -0.23
Ebf3O08791 Gm9368-201ENSMUST00000219348 831 ntBASIC13.59□□□□□ -0.23
Ebf3O08791 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.59□□□□□ -0.23
Ebf3O08791 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Ebf3O08791 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Ebf3O08791 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.59□□□□□ -0.23
Ebf3O08791 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ebf3O08791 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.59□□□□□ -0.23
Ebf3O08791 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf3O08791 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.58□□□□□ -0.23
Ebf3O08791 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf3O08791 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf3O08791 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf3O08791 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf3O08791 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.58□□□□□ -0.24
Ebf3O08791 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.58□□□□□ -0.24
Ebf3O08791 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ebf3O08791 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ebf3O08791 Gm16202-201ENSMUST00000117532 544 ntBASIC13.58□□□□□ -0.24
Ebf3O08791 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms