Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.08□□□□□ -0.16
Usp35M0QWN7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.08□□□□□ -0.16
Usp35M0QWN7 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.08□□□□□ -0.16
Usp35M0QWN7 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.08□□□□□ -0.16
Usp35M0QWN7 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.08□□□□□ -0.16
Usp35M0QWN7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.08□□□□□ -0.16
Usp35M0QWN7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.07□□□□□ -0.16
Usp35M0QWN7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Gm5370-201ENSMUST00000187187 574 ntBASIC14.07□□□□□ -0.16
Usp35M0QWN7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.07□□□□□ -0.16
Usp35M0QWN7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp35M0QWN7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp35M0QWN7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.06□□□□□ -0.16
Usp35M0QWN7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.06□□□□□ -0.16
Usp35M0QWN7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Gm16177-201ENSMUST00000120728 718 ntBASIC14.06□□□□□ -0.16
Usp35M0QWN7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.06□□□□□ -0.16
Usp35M0QWN7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Gm27331-201ENSMUST00000183705 60 ntBASIC14.06□□□□□ -0.16
Usp35M0QWN7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.06□□□□□ -0.16
Usp35M0QWN7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp35M0QWN7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp35M0QWN7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms