Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.71■□□□□ 0.11
NpcdF8VQB8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.71■□□□□ 0.11
NpcdF8VQB8 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Gm45770-201ENSMUST00000212105 616 ntBASIC15.71■□□□□ 0.11
NpcdF8VQB8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NpcdF8VQB8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NpcdF8VQB8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
NpcdF8VQB8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
NpcdF8VQB8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
NpcdF8VQB8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
NpcdF8VQB8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
NpcdF8VQB8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
NpcdF8VQB8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
NpcdF8VQB8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.7■□□□□ 0.1
NpcdF8VQB8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Gm2445-201ENSMUST00000182798 989 ntBASIC15.7■□□□□ 0.1
NpcdF8VQB8 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NpcdF8VQB8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.69■□□□□ 0.1
NpcdF8VQB8 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.69■□□□□ 0.1
NpcdF8VQB8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.69■□□□□ 0.1
NpcdF8VQB8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.69■□□□□ 0.1
NpcdF8VQB8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm11597-201ENSMUST00000121423 964 ntBASIC15.69■□□□□ 0.1
NpcdF8VQB8 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm17208-201ENSMUST00000168388 535 ntBASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm45219-201ENSMUST00000205602 465 ntBASIC15.69■□□□□ 0.1
NpcdF8VQB8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.69■□□□□ 0.1
NpcdF8VQB8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
NpcdF8VQB8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms