Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Gm11978-201ENSMUST00000122315 466 ntBASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Gm28631-201ENSMUST00000190740 334 ntBASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Gm19220-201ENSMUST00000222682 803 ntBASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdh9F8VPK8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Pcdh9F8VPK8 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.4□□□□□ -0.27
Pcdh9F8VPK8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh9F8VPK8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh9F8VPK8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Gm15371-201ENSMUST00000117057 784 ntBASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Gm12859-201ENSMUST00000117834 427 ntBASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh9F8VPK8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms