Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb9E9Q5G2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb9E9Q5G2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb9E9Q5G2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb9E9Q5G2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb9E9Q5G2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Gm27572-201ENSMUST00000183702 255 ntBASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Gm38002-201ENSMUST00000193255 180 ntBASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb9E9Q5G2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Gm9823-201ENSMUST00000051212 327 ntBASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb9E9Q5G2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb9E9Q5G2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb9E9Q5G2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb9E9Q5G2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb9E9Q5G2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb9E9Q5G2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Pcdhb9E9Q5G2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb9E9Q5G2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb9E9Q5G2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb9E9Q5G2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Gm3890-201ENSMUST00000182416 207 ntBASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Gm8099-201ENSMUST00000200510 742 ntBASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Gm18041-201ENSMUST00000218210 618 ntBASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms