Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Gm34023-201ENSMUST00000195539 217 ntBASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 CT485607.1-201ENSMUST00000216100 85 ntBASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Ginm1-202ENSMUST00000065124 300 ntBASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scaf11E9PZM7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Gm6652-201ENSMUST00000186414 1070 ntBASIC17.92■□□□□ 0.46
Scaf11E9PZM7 CT009713.8-202ENSMUST00000224732 385 ntBASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Gm21811-201ENSMUST00000096485 930 ntBASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scaf11E9PZM7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Gm19166-201ENSMUST00000196041 1063 ntBASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scaf11E9PZM7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.9■□□□□ 0.46
Scaf11E9PZM7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scaf11E9PZM7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scaf11E9PZM7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scaf11E9PZM7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scaf11E9PZM7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.9■□□□□ 0.46
Scaf11E9PZM7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scaf11E9PZM7 Gm12501-201ENSMUST00000119163 529 ntBASIC17.9■□□□□ 0.46
Scaf11E9PZM7 Mir1901-201ENSMUST00000122616 78 ntBASIC17.9■□□□□ 0.46
Scaf11E9PZM7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC17.9■□□□□ 0.46
Scaf11E9PZM7 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms