Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Gm16202-201ENSMUST00000117532 544 ntBASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Gm43118-201ENSMUST00000199149 775 ntBASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh17E9PXF0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms