Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm6564-201ENSMUST00000075377 619 ntBASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a3E9PWQ3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Gm23604-201ENSMUST00000104311 132 ntBASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Gm37782-201ENSMUST00000194879 678 ntBASIC12.68□□□□□ -0.38
Col6a3E9PWQ3 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Gm5455-201ENSMUST00000058710 715 ntBASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Gm5650-201ENSMUST00000209641 598 ntBASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms