Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clca3bE9PUL3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Gm12291-201ENSMUST00000121627 311 ntBASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Gm7809-201ENSMUST00000153199 742 ntBASIC14.05□□□□□ -0.16
Clca3bE9PUL3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Gm38002-201ENSMUST00000193255 180 ntBASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Gm9823-201ENSMUST00000051212 327 ntBASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clca3bE9PUL3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.04□□□□□ -0.16
Clca3bE9PUL3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.04□□□□□ -0.16
Clca3bE9PUL3 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clca3bE9PUL3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Gm3890-201ENSMUST00000182416 207 ntBASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Gm27572-201ENSMUST00000183702 255 ntBASIC14.03□□□□□ -0.16
Clca3bE9PUL3 Gm43118-201ENSMUST00000199149 775 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms