Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gm22121-201ENSMUST00000175148 54 ntBASIC15.27■□□□□ 0.04
Usp42B2RQC2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp42B2RQC2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.27■□□□□ 0.03
Usp42B2RQC2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp42B2RQC2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp42B2RQC2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp42B2RQC2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp42B2RQC2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Usp42B2RQC2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Usp42B2RQC2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.27■□□□□ 0.03
Usp42B2RQC2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gm14704-201ENSMUST00000120300 874 ntBASIC15.26■□□□□ 0.03
Usp42B2RQC2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gm26185-201ENSMUST00000157692 266 ntBASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.26■□□□□ 0.03
Usp42B2RQC2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gm43818-201ENSMUST00000200605 466 ntBASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.26■□□□□ 0.03
Usp42B2RQC2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.26■□□□□ 0.03
Usp42B2RQC2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp42B2RQC2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Gm13226-201ENSMUST00000117838 404 ntBASIC15.25■□□□□ 0.03
Usp42B2RQC2 Gm1335-201ENSMUST00000121653 386 ntBASIC15.25■□□□□ 0.03
Usp42B2RQC2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Gm43433-201ENSMUST00000196573 481 ntBASIC15.25■□□□□ 0.03
Usp42B2RQC2 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.25■□□□□ 0.03
Usp42B2RQC2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.25■□□□□ 0.03
Usp42B2RQC2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.25■□□□□ 0.03
Usp42B2RQC2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.25■□□□□ 0.03
Usp42B2RQC2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp42B2RQC2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Gm14660-201ENSMUST00000119809 575 ntBASIC15.24■□□□□ 0.03
Usp42B2RQC2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Gm17208-201ENSMUST00000168388 535 ntBASIC15.24■□□□□ 0.03
Usp42B2RQC2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Gm40466-201ENSMUST00000212174 422 ntBASIC15.24■□□□□ 0.03
Usp42B2RQC2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Gm32025-201ENSMUST00000217960 307 ntBASIC15.24■□□□□ 0.03
Usp42B2RQC2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms