Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn1aA2APX8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn1aA2APX8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Scn1aA2APX8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.63□□□□□ -0.23
Scn1aA2APX8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.63□□□□□ -0.23
Scn1aA2APX8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.63□□□□□ -0.23
Scn1aA2APX8 Gm38092-201ENSMUST00000195600 653 ntBASIC13.63□□□□□ -0.23
Scn1aA2APX8 Gm18935-201ENSMUST00000212692 664 ntBASIC13.63□□□□□ -0.23
Scn1aA2APX8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.63□□□□□ -0.23
Scn1aA2APX8 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.63□□□□□ -0.23
Scn1aA2APX8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.63□□□□□ -0.23
Scn1aA2APX8 Olfr582-201ENSMUST00000098212 960 ntBASIC13.63□□□□□ -0.23
Scn1aA2APX8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scn1aA2APX8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.62□□□□□ -0.23
Scn1aA2APX8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Gm15370-201ENSMUST00000117158 253 ntBASIC13.62□□□□□ -0.23
Scn1aA2APX8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Gm13350-201ENSMUST00000120519 479 ntBASIC13.62□□□□□ -0.23
Scn1aA2APX8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.62□□□□□ -0.23
Scn1aA2APX8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.62□□□□□ -0.23
Scn1aA2APX8 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.62□□□□□ -0.23
Scn1aA2APX8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn1aA2APX8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.61□□□□□ -0.23
Scn1aA2APX8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms