Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc194A0A140LIT1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc194A0A140LIT1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc194A0A140LIT1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc194A0A140LIT1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc194A0A140LIT1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Gm14057-201ENSMUST00000120631 482 ntBASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Gm38223-201ENSMUST00000194484 695 ntBASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Gm19220-201ENSMUST00000222682 803 ntBASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc194A0A140LIT1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc194A0A140LIT1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Gm15371-201ENSMUST00000117057 784 ntBASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Gm26315-201ENSMUST00000083890 321 ntBASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc194A0A140LIT1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Gm22189-201ENSMUST00000103822 86 ntBASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms