Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Gm8463-201ENSMUST00000208573 613 ntBASIC13.1□□□□□ -0.31
H2afb2S4R1M3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.1□□□□□ -0.31
H2afb2S4R1M3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Gm11978-201ENSMUST00000122315 466 ntBASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Gm9908-201ENSMUST00000211534 448 ntBASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H2afb2S4R1M3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
H2afb2S4R1M3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
H2afb2S4R1M3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Gm11918-201ENSMUST00000121660 179 ntBASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Gm38671-201ENSMUST00000200573 130 ntBASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Gm45384-201ENSMUST00000210451 277 ntBASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms