Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm6218-201ENSMUST00000219812 628 ntBASIC12.76□□□□□ -0.37
Cdh17Q9R100 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.76□□□□□ -0.37
Cdh17Q9R100 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh17Q9R100 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Gm6983-201ENSMUST00000214912 628 ntBASIC12.75□□□□□ -0.37
Cdh17Q9R100 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.75□□□□□ -0.37
Cdh17Q9R100 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh17Q9R100 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.74□□□□□ -0.37
Cdh17Q9R100 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Gm14350-201ENSMUST00000116642 640 ntBASIC12.74□□□□□ -0.37
Cdh17Q9R100 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.74□□□□□ -0.37
Cdh17Q9R100 Gm44397-201ENSMUST00000195950 113 ntBASIC12.74□□□□□ -0.37
Cdh17Q9R100 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.74□□□□□ -0.37
Cdh17Q9R100 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.74□□□□□ -0.37
Cdh17Q9R100 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.74□□□□□ -0.37
Cdh17Q9R100 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.74□□□□□ -0.37
Cdh17Q9R100 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh17Q9R100 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.74□□□□□ -0.37
Cdh17Q9R100 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh17Q9R100 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh17Q9R100 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh17Q9R100 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms