Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.43□□□□□ -0.1
Limd1Q9QXD8 AC114573.1-201ENSMUST00000224120 1210 ntBASIC14.43□□□□□ -0.1
Limd1Q9QXD8 AC154634.3-201ENSMUST00000224589 736 ntBASIC14.43□□□□□ -0.1
Limd1Q9QXD8 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gm11964-201ENSMUST00000120982 444 ntBASIC14.42□□□□□ -0.1
Limd1Q9QXD8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.42□□□□□ -0.1
Limd1Q9QXD8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd1Q9QXD8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Gm10434-201ENSMUST00000101158 471 ntBASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Gm14704-201ENSMUST00000120300 874 ntBASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Gm29199-201ENSMUST00000187766 775 ntBASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.41□□□□□ -0.1
Limd1Q9QXD8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limd1Q9QXD8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms