Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Gm11524-201ENSMUST00000119349 807 ntBASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Gm14719-201ENSMUST00000121891 340 ntBASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Gm38144-201ENSMUST00000192790 465 ntBASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Gm19078-201ENSMUST00000206311 727 ntBASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl28Q9JIL2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Gm26464-201ENSMUST00000157094 305 ntBASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Gm28760-201ENSMUST00000185995 736 ntBASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl28Q9JIL2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl28Q9JIL2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl28Q9JIL2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccl28Q9JIL2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Ccl28Q9JIL2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl28Q9JIL2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ccl28Q9JIL2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl28Q9JIL2 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.56□□□□□ -0.72
Ccl28Q9JIL2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms